PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH02044.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | C2H2 | ||||||||
Protein Properties | Length: 128aa MW: 14027.5 Da PI: 6.9775 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 19.3 | 3.1e-06 | 17 | 41 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C C+ +F+++ nL +H rtH PNH02044.1 17 YACDypGCDAVFTQSGNLASHKRTH 41 789999******************9 PP | |||||||
2 | zf-C2H2 | 19.4 | 2.8e-06 | 47 | 71 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C C+ +F+++ nL++H rtH PNH02044.1 47 YACDypGCDAVFTQSGNLVHHKRTH 71 789999******************9 PP | |||||||
3 | zf-C2H2 | 18.2 | 7e-06 | 77 | 101 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C Cg F + nL++H rtH PNH02044.1 77 YTCDyeGCGAAFAMSGNLVHHKRTH 101 99**********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 128 aa Download sequence |
MENEKLIERT HTGEKPYACD YPGCDAVFTQ SGNLASHKRT HTGEKPYACD YPGCDAVFTQ 60 SGNLVHHKRT HTGEKPYTCD YEGCGAAFAM SGNLVHHKRT HTGEKPYACD YEGCGAALVY 120 GGYTKSQV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.2 | 6e-22 | C2H2 family protein |