PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH01555.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | C2H2 | ||||||||
Protein Properties | Length: 302aa MW: 33301.7 Da PI: 7.6549 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.3 | 1.3e-05 | 8 | 32 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C Cg F ++ +L++H rtH PNH01555.1 8 YACDykGCGAAFATSGDLVKHKRTH 32 789999******************9 PP | |||||||
2 | zf-C2H2 | 10.7 | 0.0016 | 38 | 62 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C dC F + L+ H rtH PNH01555.1 38 YACDypDCEAAFAESGALVYHKRTH 62 789999******************9 PP | |||||||
3 | zf-C2H2 | 12.5 | 0.00045 | 68 | 92 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C C+ +F + L++H rtH PNH01555.1 68 YACDyeGCDAVFAKSGGLTTHKRTH 92 789999******************9 PP | |||||||
4 | zf-C2H2 | 14.8 | 8.4e-05 | 98 | 123 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y C Cg F+++ nL+ H ++ H PNH01555.1 98 YACDyeGCGAAFTTSGNLVIHKSSlH 123 789999***************99988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence |
MHTGEKPYAC DYKGCGAAFA TSGDLVKHKR THTGEKPYAC DYPDCEAAFA ESGALVYHKR 60 THTGEKPYAC DYEGCDAVFA KSGGLTTHKR THTGEKPYAC DYEGCGAAFT TSGNLVIHKS 120 SLHTQEGQAR QKKQEQRVAR ALDKAGIPYK REHQIDFRCI GGDAGFWARV DFVIVLHGRV 180 IFLEVDEGQH KFGSYGSASC DMKRMSRILE SLADGGNTLP LVFLRYNPNV FTVDGQVVKK 240 LKAAREAVLV SVLENPASEV FSCDRPLVIQ YLYYDVVGCH AVVTRDPEYN AHIAQCCARS 300 IV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.2 | 2e-19 | C2H2 family protein |