PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PNH01403.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 100aa MW: 11119.6 Da PI: 6.511 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.2 | 4.5e-19 | 16 | 61 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+WT+eEd +l +v G+++W+tIa++++ gR++k+c++rw++ PNH01403.1 16 KGPWTPEEDSILRSLVMAQGPRNWTTIASCIP-GRSGKSCRLRWLNQ 61 79******************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 30.4 | 8.8e-10 | 69 | 100 | 2 | 35 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgR 35 g++++eEd ++ a+ q+G++ W++Ia++++ gR PNH01403.1 69 GPFSAEEDAVILWAHMQYGNK-WASIAKHLP-GR 100 89*******************.*********.98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 100 aa Download sequence |
MELEDARDLG DDDVTKGPWT PEEDSILRSL VMAQGPRNWT TIASCIPGRS GKSCRLRWLN 60 QLSPAVKSGP FSAEEDAVIL WAHMQYGNKW ASIAKHLPGR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G67300.1 | 6e-39 | MYB family protein |