PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH01079.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | C2H2 | ||||||||
Protein Properties | Length: 361aa MW: 40857.5 Da PI: 8.2206 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.9 | 1.7e-05 | 127 | 151 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C C+ F r+ nL++H rtH PNH01079.1 127 YACDypGCDAAFARSGNLVHHKRTH 151 789999******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 361 aa Download sequence |
MRVDDFSALR HEYKCGFTAE DVPFTYPRYF GVQFAVAALT LGSNEDRHAI DIVRQPFNSV 60 YLFGHEDAIR SISIDGFEAP GWEAIRNIAL HWLRIQASAR RIQLWWRHKL VARRMALSGS 120 LHREKPYACD YPGCDAAFAR SGNLVHHKRT HTGEKPYACD YEGCGAAFAE SGNLAIHKSS 180 LHSPEGQARQ KKQEQRVARA LDRAGILYKR EHQIDFRCIG DHAGFWARVD FVIVLHGRVI 240 FLEVDEEQHK FGSYGSASCD MKRMSRILES LADGGNTLPL VFLRYNPNVF TVNGKVVKKL 300 KAARESELVS LLENPASEVF SCDRPIVIQY LYYDVVGCHA AVTRDPEYNA HIAQCCARPI 360 V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.2 | 5e-10 | C2H2 family protein |