PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH00964.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | C2H2 | ||||||||
Protein Properties | Length: 1185aa MW: 128566 Da PI: 8.376 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.2 | 0.0012 | 75 | 99 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C C F + +L+rH rtH PNH00964.1 75 YACDhpGCEAAFAKSGDLTRHKRTH 99 789999******************9 PP | |||||||
2 | zf-C2H2 | 12.3 | 0.00051 | 135 | 159 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ C sF r+ +L++H rtH PNH00964.1 135 YACNhrGCEASFARSGSLVHHKRTH 159 889999******************9 PP | |||||||
3 | zf-C2H2 | 15.9 | 3.6e-05 | 195 | 219 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C C+ +F+++ nL++H rtH PNH00964.1 195 YTCDhpGCDAVFTQSGNLVHHKRTH 219 89999*******************9 PP | |||||||
4 | zf-C2H2 | 14.3 | 0.00012 | 285 | 309 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C Cg F+++ +L+ H rtH PNH00964.1 285 YACDyeSCGAAFTQSGHLTIHKRTH 309 7899999*****************9 PP | |||||||
5 | zf-C2H2 | 16.3 | 2.8e-05 | 315 | 339 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C Cg F+++ +L++H rtH PNH00964.1 315 YACDyeGCGAAFTTSGSLVKHKRTH 339 789999******************9 PP | |||||||
6 | zf-C2H2 | 12.7 | 0.0004 | 375 | 400 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y C+ Cg F+++ +L++H ++ H PNH00964.1 375 YACNydSCGAAFTQSGHLTNHKSSlH 400 889999***************99988 PP | |||||||
7 | zf-C2H2 | 11.2 | 0.0012 | 531 | 555 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C C F + +L+rH rtH PNH00964.1 531 YACDhpGCEAAFAKSGDLTRHKRTH 555 789999******************9 PP | |||||||
8 | zf-C2H2 | 11.7 | 0.00081 | 561 | 585 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C C F r+s+L H rtH PNH00964.1 561 YACDhpGCEAAFARSSSLALHKRTH 585 789999******************9 PP | |||||||
9 | zf-C2H2 | 11.2 | 0.0012 | 591 | 615 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C C F + +L+rH rtH PNH00964.1 591 YACDhpGCEAAFAKSGDLTRHKRTH 615 789999******************9 PP | |||||||
10 | zf-C2H2 | 11.7 | 0.00081 | 621 | 645 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C C F r+s+L H rtH PNH00964.1 621 YACDhpGCEAAFARSSSLALHKRTH 645 789999******************9 PP | |||||||
11 | zf-C2H2 | 12.3 | 0.00051 | 681 | 705 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ C sF r+ +L++H rtH PNH00964.1 681 YACNhrGCEASFARSGSLVHHKRTH 705 889999******************9 PP | |||||||
12 | zf-C2H2 | 12.3 | 0.00051 | 741 | 765 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ C sF r+ +L++H rtH PNH00964.1 741 YACNhrGCEASFARSGSLVHHKRTH 765 889999******************9 PP | |||||||
13 | zf-C2H2 | 15.9 | 3.6e-05 | 801 | 825 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C C+ +F+++ nL++H rtH PNH00964.1 801 YTCDhpGCDAVFTQSGNLVHHKRTH 825 89999*******************9 PP | |||||||
14 | zf-C2H2 | 11.9 | 0.00068 | 861 | 885 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C Cg F + +nL++H rtH PNH00964.1 861 YTCDypGCGAAFLTGDNLTTHKRTH 885 89**********************9 PP | |||||||
15 | zf-C2H2 | 14.8 | 8.4e-05 | 891 | 915 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ Cg F+++ +L+ H rtH PNH00964.1 891 YACNydSCGAAFTQSGHLTIHKRTH 915 889999******************9 PP | |||||||
16 | zf-C2H2 | 16.3 | 2.8e-05 | 921 | 945 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C Cg F+++ +L++H rtH PNH00964.1 921 YACDyeGCGAAFTTSGSLVKHKRTH 945 789999******************9 PP | |||||||
17 | zf-C2H2 | 11.9 | 0.00068 | 951 | 975 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C Cg F + +nL++H rtH PNH00964.1 951 YTCDypGCGAAFLTGDNLTTHKRTH 975 89**********************9 PP | |||||||
18 | zf-C2H2 | 12.7 | 0.0004 | 981 | 1006 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y C+ Cg F+++ +L++H ++ H PNH00964.1 981 YACNydSCGAAFTQSGHLTNHKSSlH 1006 889999***************99988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1185 aa Download sequence |
MNSPPRPLNA PKETDGPGRC NYKVTNARSG ILALHKRTHT GEKPYACDHP GCEAAFATSG 60 GLTTHKRTHT GEKPYACDHP GCEAAFAKSG DLTRHKRTHT GEKPYACDHP GCEAAFATSG 120 GLTTHKRTHT GEKPYACNHR GCEASFARSG SLVHHKRTHT GEKPYACDHP GCEAAFATSG 180 GLVTHKRTHT GEKPYTCDHP GCDAVFTQSG NLVHHKRTHT GEKPNACDHP GCEVAFATSG 240 GLVTHKRTHT GEKPYACDHP GCEAAFVTSG ELTTHKRTHT GEKPYACDYE SCGAAFTQSG 300 HLTIHKRTHT GEKPYACDYE GCGAAFTTSG SLVKHKRTHT GEKPYACDYP GCGAAFLTGD 360 NLTTHKRTHT GEKPYACNYD SCGAAFTQSG HLTNHKSSLH SPEGQARQKK QEQRVARALD 420 RAGIPYKREH QIDFRCIGGD AGFWARVDFV ILLHGRVIFL EVDEGQHKFG SYGSASCDMK 480 RMSRILESLA DGGNTLPLET DGPGRCNYKV TNARSGILAL HKRTHTGEKP YACDHPGCEA 540 AFAKSGDLTR HKRTHTGEKP YACDHPGCEA AFARSSSLAL HKRTHTGEKP YACDHPGCEA 600 AFAKSGDLTR HKRTHTGEKP YACDHPGCEA AFARSSSLAL HKRTHTGEKP YACDHPGCEA 660 AFATSGGLTT HKRTHTGEKP YACNHRGCEA SFARSGSLVH HKRTHTGEKP YACDHPGCEA 720 AFATSGGLVT HKRTHTGEKP YACNHRGCEA SFARSGSLVH HKRTHTGEKP YACDHPGCEA 780 AFATSGGLVT HKRTHTGEKP YTCDHPGCDA VFTQSGNLVH HKRTHTGEKP NACDHPGCEV 840 AFATSGGLVT HKRTHTGEKP YTCDYPGCGA AFLTGDNLTT HKRTHTGEKP YACNYDSCGA 900 AFTQSGHLTI HKRTHTGEKP YACDYEGCGA AFTTSGSLVK HKRTHTGEKP YTCDYPGCGA 960 AFLTGDNLTT HKRTHTGEKP YACNYDSCGA AFTQSGHLTN HKSSLHSPEG QARQKKQEQR 1020 VARALDRAGI PYKREHQIDF RCIGGDAGFW ARVDFVILLH GRVIFLEVDE GQHKFGSYGS 1080 ASCDMKRMSR ILESLADGGN TLPLVFLRYN PNVFTVNGKV VKKLKAAREA ELVSLLENPM 1140 SDALSCARPL VIQYMFYDVI GCHAVVTRDP EYTAHIAQCC TCPIV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.2 | 3e-22 | C2H2 family protein |