PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNG99875.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | C2H2 | ||||||||
Protein Properties | Length: 319aa MW: 35781.6 Da PI: 8.7622 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.8 | 0.00075 | 57 | 81 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C C F + +L+rH r+H PNG99875.1 57 YACDhpGCEAAFAMSGDLTRHKRSH 81 789999******************9 PP | |||||||
2 | zf-C2H2 | 15.5 | 4.9e-05 | 87 | 111 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C Cg F + +L+rH rtH PNG99875.1 87 YACDyeGCGAAFAMRGDLTRHKRTH 111 789999******************9 PP | |||||||
3 | zf-C2H2 | 13.9 | 0.00016 | 117 | 141 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ Cg F+++ +L+ H ++H PNG99875.1 117 YACNyeSCGAAFTQSGHLTDHKSVH 141 889999****************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 319 aa Download sequence |
MLKSRGAFTK SSHLTKHKRT HTGEKPYACD YEGCCASFAE SGHLVNHKRT HTGKKPYACD 60 HPGCEAAFAM SGDLTRHKRS HTGEKLYACD YEGCGAAFAM RGDLTRHKRT HTGEKPYACN 120 YESCGAAFTQ SGHLTDHKSV HNPEGQARQK KQEQRVARAL DRAGIPYKRE HQIDFRCIGG 180 DAGFWARVDF VIVLHGRVIF LEVDEGQHKF GSYGSASCDM KRMSRIQESL FDGGNTLPLV 240 FLRYNPNVFR VDGKVVKKLK VMREAELVSL LENSTSDAFS CARPLVIQYM YYDVVGCHSV 300 TRDPEYHGHI AQCCARPIV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.2 | 4e-19 | C2H2 family protein |