PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO03898.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 389aa MW: 43461 Da PI: 9.8405

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO03898.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.3	1.7e-54	52	178	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeel+++yL +k+++ +++ ++i++vd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++++ ++e POO03898.1 52 LPPGFRFHPTDEELITFYLMNKITDATFTG-RAITDVDLNKCEPWELPAKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSvTSE 149 79***********************999.89***********99999************************************998999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyr 127 lvg+kktLvfy+grap+gek++Wvmheyr POO03898.1 150 LVGMKKTLVFYRGRAPRGEKSNWVMHEYR 178 9*************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MKTSKPNRRF SMQARKKQTS TTQKEKEEIS TKNSTTTTDM SGSDGNNKDE KLPPGFRFHP 60 TDEELITFYL MNKITDATFT GRAITDVDLN KCEPWELPAK AKMGEKEWYF FSLRDRKYPT 120 GVRTNRATNT GYWKTTGKDK EIFNSVTSEL VGMKKTLVFY RGRAPRGEKS NWVMHEYRNH 180 SKSAFRTSKD EWVVCRVFQK SAGAKKYPTT QPRTINPYAL ETGPTMLPSP MMQLAAGDPT 240 QFLFARNNFN MTNPELAELS RVLRAGGGGS STGVNLPIPS QFNYPAPGGG CLTISGLNLN 300 LGGPPTQPVF RPVPPPPPMQ HNAPPQMNLN QHDIITSSMM SSTSGSFGQD HMTSTGYGTD 360 VNNVPSGPNS RPYMNVDNCM DLENYWPAY

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MKTSKPNRRF SMQARKKQTS TTQKEKEEIS TKNSTTTTDM SGSDGNNKDE KLPPGFRFHP  60
TDEELITFYL MNKITDATFT GRAITDVDLN KCEPWELPAK AKMGEKEWYF FSLRDRKYPT  120
GVRTNRATNT GYWKTTGKDK EIFNSVTSEL VGMKKTLVFY RGRAPRGEKS NWVMHEYRNH  180
SKSAFRTSKD EWVVCRVFQK SAGAKKYPTT QPRTINPYAL ETGPTMLPSP MMQLAAGDPT  240
QFLFARNNFN MTNPELAELS RVLRAGGGGS STGVNLPIPS QFNYPAPGGG CLTISGLNLN  300
LGGPPTQPVF RPVPPPPPMQ HNAPPQMNLN QHDIITSSMM SSTSGSFGQD HMTSTGYGTD  360
VNNVPSGPNS RPYMNVDNCM DLENYWPAY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	1e-102	NAC family protein