PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO03504.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 289aa MW: 32905.1 Da PI: 8.6546

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO03504.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174.8	2.6e-54	9	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+ +yLk++++++++++ ++i+evdiyk++Pw+Lp k++ +ekewyfFs+rd+ky++g r+nrat sgyWkatg+dk+++s +++ POO03504.1 9 LPPGFRFHPTDEELIIYYLKNQATSRPCPV-SIIPEVDIYKFDPWQLPDKAEFGEKEWYFFSPRDRKYPNGVRPNRATVSGYWKATGTDKAIYS-GSKY 105 79**************************.89***********99999**************************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kk Lvfykg+ pkg ktdW+mheyrl POO03504.1 106 VGVKKALVFYKGKPPKGLKTDWIMHEYRL 134 ***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MEAKTGSGLP PGFRFHPTDE ELIIYYLKNQ ATSRPCPVSI IPEVDIYKFD PWQLPDKAEF 60 GEKEWYFFSP RDRKYPNGVR PNRATVSGYW KATGTDKAIY SGSKYVGVKK ALVFYKGKPP 120 KGLKTDWIMH EYRLTDSRRQ INKHVGSMRL DDWVLCRIYK KRNVSKALDM EPKVEDSSPL 180 NVDLTGANNE ANIEEQQMLK FPRTYSLAHL LELDYLGPIS QLLSSDNSYN SAHDFLNNST 240 TLTSLGSTGS VHKVEFGAMS YQNADSGRFQ VAQSSAFNQG SYDMYCLDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	1e-118	NAC family protein