PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02792.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 290aa    MW: 32512 Da    PI: 8.119
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02792.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.49.7e-20164213255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+W+AeIrdp+    r +r++lg+f tae+Aa+a+++a+ +++g
  POO02792.1 164 NYRGVRQRP-WGKWAAEIRDPR----RaARVWLGTFETAEQAARAYDRAAIEFRG 213
                 59*******.**********82....48************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MFEIFAKKTP VKRENPQKPP ELSGILTNMS FPFVRVSVDE EHSIMVSALE HVISGEIDSI  60
VGPTTKAQQQ KQQDSYSSQV QPLRSATSAI SSTGGNVLSF PDTDTCRVCE INGCLGCNFF  120
PPSNERGGLA AVANTASFPK STSFAKTRAS NDNDGNKRRR KKKNYRGVRQ RPWGKWAAEI  180
RDPRRAARVW LGTFETAEQA ARAYDRAAIE FRGSKAKLNF PMSDYNDGNR DDQSEQHRRA  240
HDRKPNCESA SGGSGIENGG ENDNDECAFW EMVDDWLTMM NSEYERRELR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156163NKRRRKKK
2157163KRRRKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-31ERF family protein