PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | POO00923.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | GeBP | ||||||||
Protein Properties | Length: 234aa MW: 26291.4 Da PI: 5.0757 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 79.9 | 4e-25 | 40 | 134 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWg 97 +qrl+ eeDei++LqGli+f +k+g + + +++f++ + s+ +vs++ql + +K+Kf++++ + ++++++p+f+++hdqk++elsk+iWg POO00923.1 40 SSQRLFGEEDEILILQGLIEFYEKNGNN--SSVSEFCDVMAASLGENVSQKQLNGIVCCMKRKFEDNELQkSDDDESPAFASPHDQKVYELSKMIWG 134 58************************66..5689******************************9876553889999*******************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MEDAYNSMVP DSADEDEPKQ KKSKFSAEEK MKRVADASPS SQRLFGEEDE ILILQGLIEF 60 YEKNGNNSSV SEFCDVMAAS LGENVSQKQL NGIVCCMKRK FEDNELQKSD DDESPAFASP 120 HDQKVYELSK MIWGNRIRTT TTTTTTTTTT TTGGGGGAAA AANNEDRLGM LFYDFYSRHG 180 LNLDLFEESK GLYLAKRWAK FKVSECKYLI QRSKFEAKMQ NVKLQAYKKE SVGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G11510.1 | 8e-17 | GeBP family protein |