PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | POO00666.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | bZIP | ||||||||
Protein Properties | Length: 214aa MW: 24467.5 Da PI: 11.046 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.1 | 2.9e-11 | 100 | 145 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++ rr+++NRe+ArrsR RK++ +e+L++ v L eN++L ++l POO00666.1 100 RKRRRMISNRESARRSRMRKQKHLENLRNQVNRLRVENRELTNRLR 145 5789*************************************98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MISTFPSIFP SSDSILGNPF PSFDGGFTPW DCRELFPATP PLKPADDTSN SISSGDILVQ 60 SPKPIMSGSG SGSEDPNSNR SDSKPEQTGP NRAVSVVDER KRRRMISNRE SARRSRMRKQ 120 KHLENLRNQV NRLRVENREL TNRLRFVLYH YQRVRTENGR LRSEHVALRQ KLYDIRQILL 180 FRQFQQFSSP ATTTTTTTWP CNTVISEQTP SLIT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 100 | 104 | RKRRR |
2 | 100 | 121 | RKRRRMISNRESARRSRMRKQK |
3 | 113 | 120 | RRSRMRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49760.1 | 4e-34 | bZIP family protein |