PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO00332.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 372aa MW: 41809.1 Da PI: 8.0401

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO00332.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.5	1.2e-53	8	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.... 95 lppGfrFhPtdeel+ +yL+k+v++++l++ ++i+evdiyk++Pw+Lp+k++ +ekewyfFs+rd+ky++g r+nra++sgyWkatg+dk++++ POO00332.1 8 LPPGFRFHPTDEELILHYLRKRVTSTPLPV-SIIAEVDIYKFDPWELPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVTPvaag 105 79**************************.89***********988899************************************99999 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++++g+kk Lvfykgr pkg+kt+W+mheyrl POO00332.1 106 gGHRNIGVKKALVFYKGRPPKGVKTNWIMHEYRL 139 88889*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MKNPQTNLPP GFRFHPTDEE LILHYLRKRV TSTPLPVSII AEVDIYKFDP WELPAKAAFG 60 EKEWYFFSPR DRKYPNGARP NRAAASGYWK ATGTDKTIVT PVAAGGGHRN IGVKKALVFY 120 KGRPPKGVKT NWIMHEYRLA ETPTYAYSNI NKPNKLNDSS MRLDDFVLCR IYKKTNVVHP 180 TATIPSDQEE EEQFIQEALL PCLKGDQENS INMPQKSSSF SNLLDAMDYS ILSSLLSECP 240 SNSTGFDQSI STGFNTGTST NTTTTLDQSF FVNGCSSTSN SISSSSNYMQ LPNKLPQLQF 300 PAPTSVENRL KRQLSSPDDQ HDLLCPPKKC MNTCSFINST IQSDNYIPQN NLMNQLFLNQ 360 QLFLSPELQF QG

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MKNPQTNLPP GFRFHPTDEE LILHYLRKRV TSTPLPVSII AEVDIYKFDP WELPAKAAFG  60
EKEWYFFSPR DRKYPNGARP NRAAASGYWK ATGTDKTIVT PVAAGGGHRN IGVKKALVFY  120
KGRPPKGVKT NWIMHEYRLA ETPTYAYSNI NKPNKLNDSS MRLDDFVLCR IYKKTNVVHP  180
TATIPSDQEE EEQFIQEALL PCLKGDQENS INMPQKSSSF SNLLDAMDYS ILSSLLSECP  240
SNSTGFDQSI STGFNTGTST NTTTTLDQSF FVNGCSSTSN SISSSSNYMQ LPNKLPQLQF  300
PAPTSVENRL KRQLSSPDDQ HDLLCPPKKC MNTCSFINST IQSDNYIPQN NLMNQLFLNQ  360
QLFLSPELQF QG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.1	1e-108	NAC family protein