PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO00295.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 637aa MW: 71473 Da PI: 4.32

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO00295.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.2	1.4e-52	15	141	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 ppGfrFhPtdeel+ +yLkkk+ gkkl+l +vi+e+d+yk++P++Lp + +k+++++w+fFs+rd+ky++g r+nrat++gyWkatgkd+ +++ +++ POO00295.1 15 PPGFRFHPTDEELILYYLKKKICGKKLRL-NVIAETDVYKWDPEELPglSILKTGDRQWFFFSPRDRKYPNGARSNRATRHGYWKATGKDRIITC-NSR 111 8**************************.99***********644778899***********************************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 vg+kktLvfy+grap+ge+tdWvmhey+l POO00295.1 112 SVGVKKTLVFYRGRAPHGERTDWVMHEYTL 141 **************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 637 aa Download sequence
MVSQIGGFTD GQDWPPGFRF HPTDEELILY YLKKKICGKK LRLNVIAETD VYKWDPEELP 60 GLSILKTGDR QWFFFSPRDR KYPNGARSNR ATRHGYWKAT GKDRIITCNS RSVGVKKTLV 120 FYRGRAPHGE RTDWVMHEYT LDEDELKRCQ NVQEYYALYK VYKKSGPGPK NGEQYGAPFR 180 EEEWNDECPD FNNSSTLETP VERVDGVLSN GETGADCQVE SISDDIDELL KQITEEPLLD 240 LPEVREYVDN PPSQVLSNND THSTIVDPHC RGIIFHEPIN LFYTSGEHHN VQASSFELSR 300 SDVSQLQLHE SPEVAVAPSI HEQEVYVLPE EDFLEMDDLL GPEPAKTDAE KPLDDFQLEQ 360 VDGLMEFDLY HDAAMFLNDI GPGDQSTVSY QHVNSLEQNV ANQYEYQINT TPVGPGEVDN 420 PLCLEGADQI TNLLYLEGAD QVNSQLYLED ANPMNNQLYL EGANPMSNQL SLEGANEMNY 480 HFQFQLDDAS QANGQERNIL TSTDFGQASH SDPTSGVVYG SSTFSLQGNQ NQSGNDDSGN 540 TSWISSALWS FVESIPTTPA SAAENALVNR AFERMSSFSR MRINVVNANV HAGSDSETTK 600 SSGRIRGFIL FPILVALIAI LWVVLGTVRV WRSSIAA

Sequence ? help Back to Top

Protein Sequence Length: 637 aa Download sequence

MVSQIGGFTD GQDWPPGFRF HPTDEELILY YLKKKICGKK LRLNVIAETD VYKWDPEELP  60
GLSILKTGDR QWFFFSPRDR KYPNGARSNR ATRHGYWKAT GKDRIITCNS RSVGVKKTLV  120
FYRGRAPHGE RTDWVMHEYT LDEDELKRCQ NVQEYYALYK VYKKSGPGPK NGEQYGAPFR  180
EEEWNDECPD FNNSSTLETP VERVDGVLSN GETGADCQVE SISDDIDELL KQITEEPLLD  240
LPEVREYVDN PPSQVLSNND THSTIVDPHC RGIIFHEPIN LFYTSGEHHN VQASSFELSR  300
SDVSQLQLHE SPEVAVAPSI HEQEVYVLPE EDFLEMDDLL GPEPAKTDAE KPLDDFQLEQ  360
VDGLMEFDLY HDAAMFLNDI GPGDQSTVSY QHVNSLEQNV ANQYEYQINT TPVGPGEVDN  420
PLCLEGADQI TNLLYLEGAD QVNSQLYLED ANPMNNQLYL EGANPMSNQL SLEGANEMNY  480
HFQFQLDDAS QANGQERNIL TSTDFGQASH SDPTSGVVYG SSTFSLQGNQ NQSGNDDSGN  540
TSWISSALWS FVESIPTTPA SAAENALVNR AFERMSSFSR MRINVVNANV HAGSDSETTK  600
SSGRIRGFIL FPILVALIAI LWVVLGTVRV WRSSIAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-134	NAC family protein