PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO00192.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family NAC
Protein Properties Length: 330aa    MW: 38135.4 Da    PI: 6.5087
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO00192.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.43.4e-5471351128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 +ppGfrFhPt+eelv +yLk+k+++ k++l +vi +vd+yk+ePwd+++     + e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+vls k
  POO00192.1   7 VPPGFRFHPTEEELVGYYLKRKINALKIDL-DVIVDVDLYKMEPWDIQArcnLGYDEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVLS-K 103
                 69****************************.99**************953432233677**************************************.8 PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                 ++ +g++ktLvfykgrap+g+ktdW+mheyrl
  POO00192.1 104 NRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRL 135
                 999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MEMESCVPPG FRFHPTEEEL VGYYLKRKIN ALKIDLDVIV DVDLYKMEPW DIQARCNLGY  60
DEQNEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAV LSKNRIIGMR KTLVFYKGRA  120
PNGRKTDWIM HEYRLQTTEH ALPQEEGWVV CRAFRKPSPS HQRQGFEVWN HAYYVRENSS  180
IRFPNTSADF MEEKHLVNPN QAAAAASFHN CFASAQELVS NNHNVADHIQ LSEVLPQLDS  240
PSSISASLAT NENFQHNSST IINEDNYDNN ERSNSSSQYI DWKNLDNFLS SQLTDPITHF  300
VSSDLSSMPQ NYLHEAQQNR HFLGCFPDQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.12e-99NAC family protein