PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON99493.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 394aa MW: 45151.7 Da PI: 5.8678

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON99493.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.1	1.2e-55	10	139	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL++ ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v++ k PON99493.1 10 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLQErcrIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYD-K 106 69**************************.9***********953432233667**********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 +l+g++ktLvfykgrap+g+ktdW+mheyrle PON99493.1 107 AKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLE 139 99***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MESMESSSTV PPGFRFHPTD EELVGYYLRK KVASQKIDLD VIRDIDLYRI EPWDLQERCR 60 IGYEEQNEWY FFSHKDKKYP TGTRTNRATM AGFWKATGRD KAVYDKAKLI GMRKTLVFYK 120 GRAPNGQKTD WIMHEYRLES DENGPPQEEG WVVCRAFKKR TNGQTKTIEG WESGYFYDEP 180 STGVSSVVDP VDYISRHNNP QSFLSSSQSF MCKQELEADN LSFNHILQNN NNTSTIQADH 240 PHHHHHHHHH HQFVQLPQLE SPSLPLIKRP PSSVSLISEV NEEEDQSKGC MDHNNNNSGN 300 IIIDNNAKNH VVTTDWRALD KFVASQLSQD QDRFGDGDGE SSSFGVVNHH DEDPDTTAFM 360 LSLQSSTRDE GNRLNAFLNS SSADCDFGIC IFDK

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MESMESSSTV PPGFRFHPTD EELVGYYLRK KVASQKIDLD VIRDIDLYRI EPWDLQERCR  60
IGYEEQNEWY FFSHKDKKYP TGTRTNRATM AGFWKATGRD KAVYDKAKLI GMRKTLVFYK  120
GRAPNGQKTD WIMHEYRLES DENGPPQEEG WVVCRAFKKR TNGQTKTIEG WESGYFYDEP  180
STGVSSVVDP VDYISRHNNP QSFLSSSQSF MCKQELEADN LSFNHILQNN NNTSTIQADH  240
PHHHHHHHHH HQFVQLPQLE SPSLPLIKRP PSSVSLISEV NEEEDQSKGC MDHNNNNSGN  300
IIIDNNAKNH VVTTDWRALD KFVASQLSQD QDRFGDGDGE SSSFGVVNHH DEDPDTTAFM  360
LSLQSSTRDE GNRLNAFLNS SSADCDFGIC IFDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	1e-147	NAC family protein