PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON99201.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

C2H2

Protein Properties

Length: 308aa MW: 33868 Da PI: 6.9403

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON99201.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.3	0.00026	116	138	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H PON99201.1 116 FSCNYCQRKFYSSQALGGHQNAH 138 89*****************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MDQLPSTRTN EPSSCPNTEF DHGHDRDPDH DYDHQDQEDD DHQEKERMIT ANESGKFSLD 60 LNLTGTTTES SNIIDDGLTD NQELNLIDSL AAAAAVAAVA SSPSSEHAAA EPGRVFSCNY 120 CQRKFYSSQA LGGHQNAHKR ERTLAKRSGQ RLLGNDHVMA AAAAFGGHHH HPFFSRRHWS 180 SMASLPLHGA NVYNNRSLGI QVHSMIHKPN SQYHNSCSTM LHGNFGSWPK LPPNSFDQQP 240 AIGKHTTTNG LSSKVSAGRF DVPKTTMIGA SQSGHERING ARYNWCASGA THDHRNDETK 300 KLDLSLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80730.1	5e-33	C2H2 family protein