PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON98679.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB

Protein Properties

Length: 286aa MW: 32704.8 Da PI: 5.2243

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON98679.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.1	2.1e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ v+++G g+W++ ++ g+ R++k+c++rw +yl PON98679.1 14 KGPWTPEEDQILISFVQKYGHGNWRALPKQAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	53.7	4.6e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE+e +++++++lG++ W++Ia++++ gRt++++k+ w+++l PON98679.1 67 RGNFTREEEETIIKLHEMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MVRAPCCEKM GLKKGPWTPE EDQILISFVQ KYGHGNWRAL PKQAGLLRCG KSCRLRWINY 60 LRPDIKRGNF TREEEETIIK LHEMLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLNNSD 120 TDKDYSAKRH RTTRGDKTKV TVQSESSDHL HASATSGSHV NSPQPCSSSD LSSLTDTSFG 180 AEETTNDNDQ NDSMVIVVKD DDDENNMGYN HQFSSESTFP EIDESFWSDQ ANSAQENTNP 240 LEFSDAQFQN DHLFSTWSNN TNDQYDMDFW YNIFIKAGGS PELPEF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	1e-85	MYB family protein