PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON98608.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 578aa MW: 64436.6 Da PI: 4.3644

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON98608.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.4	2.9e-53	9	137	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 l+pGfrFhPtdeelv++yLk+kv gk+l++ + i+ vdiyk+ePwdLp k ++k+++ ewyfFs dkky +g r+nrat++gyWk+tgkd+++++ k+ PON98608.1 9 LAPGFRFHPTDEELVSYYLKRKVCGKPLRV-DPISVVDIYKIEPWDLPdKsRLKTRDLEWYFFSALDKKYGNGWRTNRATEKGYWKTTGKDRPIHH-KS 105 579*************************.89**********95347777888**********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrle 129 ++ g+kktLvf++grapkg +t+Wvmheyrle PON98608.1 106 RVAGMKKTLVFHTGRAPKGARTNWVMHEYRLE 137 9***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 578 aa Download sequence
MGRDSSTSLA PGFRFHPTDE ELVSYYLKRK VCGKPLRVDP ISVVDIYKIE PWDLPDKSRL 60 KTRDLEWYFF SALDKKYGNG WRTNRATEKG YWKTTGKDRP IHHKSRVAGM KKTLVFHTGR 120 APKGARTNWV MHEYRLEDEE LKKAGIPQDA FVLCRIFQKS GTGPKNGEQY GAPFIEEEWE 180 DDEVALVPGE EVLSGEVVVD DGAYVDVNEL DQNFGTGIPS EIVAGPWNFY HGETSNYVEN 240 SGDFADDPSE IAPLPQNFYH GETSNYFEHS GDFAEDDLKP VIARETSELG DEQIFVQLPE 300 QYEMNAQPVK EEYFVQPTDS GNPVDVNYSL GEQYLDATDN PPFGEGLYLE TNDLSKPIEG 360 EPQASDMLDE FLNYFDPEED ISQYLDLDSS QIMGVETNVT EEDPLPQKLV TGEAEIVPTG 420 AEHLVEAHHD NNGASSSNQK AEVAKFESDF KYQFSKQASH MLGSIPAPPA FAAEFPTKDA 480 ALRLNSVGQS SSSVHVTAAM IRIRNLSLDG NGTDWSFGKN GNVDLILADV SSASMLPMAG 540 VLSGKTASVV TKGLFFFMFI WVLIISLSFK IGSHIYTR

Sequence ? help Back to Top

Protein Sequence Length: 578 aa Download sequence

MGRDSSTSLA PGFRFHPTDE ELVSYYLKRK VCGKPLRVDP ISVVDIYKIE PWDLPDKSRL  60
KTRDLEWYFF SALDKKYGNG WRTNRATEKG YWKTTGKDRP IHHKSRVAGM KKTLVFHTGR  120
APKGARTNWV MHEYRLEDEE LKKAGIPQDA FVLCRIFQKS GTGPKNGEQY GAPFIEEEWE  180
DDEVALVPGE EVLSGEVVVD DGAYVDVNEL DQNFGTGIPS EIVAGPWNFY HGETSNYVEN  240
SGDFADDPSE IAPLPQNFYH GETSNYFEHS GDFAEDDLKP VIARETSELG DEQIFVQLPE  300
QYEMNAQPVK EEYFVQPTDS GNPVDVNYSL GEQYLDATDN PPFGEGLYLE TNDLSKPIEG  360
EPQASDMLDE FLNYFDPEED ISQYLDLDSS QIMGVETNVT EEDPLPQKLV TGEAEIVPTG  420
AEHLVEAHHD NNGASSSNQK AEVAKFESDF KYQFSKQASH MLGSIPAPPA FAAEFPTKDA  480
ALRLNSVGQS SSSVHVTAAM IRIRNLSLDG NGTDWSFGKN GNVDLILADV SSASMLPMAG  540
VLSGKTASVV TKGLFFFMFI WVLIISLSFK IGSHIYTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-171	NAC family protein