PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON98324.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 214aa MW: 24749.2 Da PI: 7.6142 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 84.6 | 5.8e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKA ELS+LCdae+a+i+fs tgkly+y+s PON98324.1 9 KKIDNITARQVTFSKRRRGLFKKALELSTLCDAEIALIVFSATGKLYDYAS 59 68***********************************************86 PP | |||||||
2 | K-box | 45.4 | 3.4e-16 | 92 | 171 | 19 | 98 |
K-box 19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 a L+ e+e+ e+Rh++Ge+L++Lsl+e+++Le+ +e++l+++ + K++ l++i l++k elqe+n++L++k PON98324.1 92 SRCASLRTELEEKTMELRHMKGEELQELSLEEIKKLENLIETGLSRVTELKDQRSLKEITFLKRKGIELQEDNHRLKQKT 171 567889999999999**************************************************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MTRQKIEIKK IDNITARQVT FSKRRRGLFK KALELSTLCD AEIALIVFSA TGKLYDYASS 60 SMQQVIQRHN CHSENHHKLS QPSVDVLECE RSRCASLRTE LEEKTMELRH MKGEELQELS 120 LEEIKKLENL IETGLSRVTE LKDQRSLKEI TFLKRKGIEL QEDNHRLKQK TNVVQVQADL 180 LEKHLIDSIT DIYNTTNSLP DQDHYGSDTT LKLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 7e-55 | MIKC_MADS family protein |