PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON98190.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB

Protein Properties

Length: 264aa MW: 30264 Da PI: 8.4619

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON98190.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.1	1.7e-17	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed++l+d+++++G g+W+t ++ g+ R++k+c++rw +yl PON98190.1 13 KGAWSKQEDQKLIDYINKHGEGCWRTLPKAAGLLRCGKSCRLRWINYL 60 79****************************99**********97 PP
2	Myb_DNA-binding	51.8	1.9e-16	66	111	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l PON98190.1 66 RGNFAEDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 111 8999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MRKPCCDKQD INKGAWSKQE DQKLIDYINK HGEGCWRTLP KAAGLLRCGK SCRLRWINYL 60 RPDLKRGNFA EDEEDLIIKL HALLGNRWSL IAGRLPGRTD NEIKNYWNSH LRRKLLNKGI 120 DPNNHRLRQI TSVGPRPMNV NSQTHPNTIS SPTVAKSQEE DNQPLAKRRR ESCPDHEVSD 180 AGSCLEDNEY YYSSSAHQLP DLNLDLTMSN TIIPLPTPNY NTSNTTIVKE EQKYGQNYPN 240 DQLRKDYMSS EVLVDSAPTL SLFT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09460.1	1e-79	MYB family protein