PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97828.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

G2-like

Protein Properties

Length: 475aa MW: 51166 Da PI: 6.3423

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97828.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.7	1.1e-27	188	242	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+aveqL G +kA+P++ilelm++++Lt+++++SHLQkYR++ PON97828.1 188 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILELMGIDCLTRHNIASHLQKYRSH 242 5689***************.******************************86 PP
2	Myb_DNA-binding	39.4	1.4e-12	191	240	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg +t+ ++ s++qky+ PON97828.1 191 VDWTPELHRRFVQAVEQLGVDkaVPSRILELMGiDCLTRHNIASHLQKYR 240 57******************************889**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MLTVSPLRDT YTTRDEKQGE ALDSSTNSST ISFSSSINGG DAFPDFADSN LLDSIDFDDL 60 FIGIHVDGDV LPDLEMDPEI LADFSAEDYN SDVNTSVSAD RSADVDDNVG NSTNAVDQDK 120 TKAAEVEDDN DKVSGSGSGL DSSPSESVAR NNGASSTKTN TKEAADKGGG RKSTSTAQSK 180 NNSQGKRKVK VDWTPELHRR FVQAVEQLGV DKAVPSRILE LMGIDCLTRH NIASHLQKYR 240 SHRKHLLARE AEAASWSQRR QMYGSAGGGG GGATGKRDVS PWPVAPTMGF PPMTPPPVQP 300 VPPPMHHHFR PLHVWGHPTI DQSLMHVWPP KHLPHSPSHP PPQAWPPVTH PPPPDPSYWR 360 SHHQRVPNAL TPGTPCFPQT LATAPRFATP PVPGIPPPHA MYKVDTGNGS LTNGQSGPLP 420 LFDFHPSKES VDSAIGDVLA KPWLPLPLGL KPPSMDSVMV ELQRQGVPKV PPSCA

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MLTVSPLRDT YTTRDEKQGE ALDSSTNSST ISFSSSINGG DAFPDFADSN LLDSIDFDDL  60
FIGIHVDGDV LPDLEMDPEI LADFSAEDYN SDVNTSVSAD RSADVDDNVG NSTNAVDQDK  120
TKAAEVEDDN DKVSGSGSGL DSSPSESVAR NNGASSTKTN TKEAADKGGG RKSTSTAQSK  180
NNSQGKRKVK VDWTPELHRR FVQAVEQLGV DKAVPSRILE LMGIDCLTRH NIASHLQKYR  240
SHRKHLLARE AEAASWSQRR QMYGSAGGGG GGATGKRDVS PWPVAPTMGF PPMTPPPVQP  300
VPPPMHHHFR PLHVWGHPTI DQSLMHVWPP KHLPHSPSHP PPQAWPPVTH PPPPDPSYWR  360
SHHQRVPNAL TPGTPCFPQT LATAPRFATP PVPGIPPPHA MYKVDTGNGS LTNGQSGPLP  420
LFDFHPSKES VDSAIGDVLA KPWLPLPLGL KPPSMDSVMV ELQRQGVPKV PPSCA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	6e-83	G2-like family protein