PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97166.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 489aa MW: 54976.3 Da PI: 6.3655

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97166.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	113.9	1.7e-35	12	142	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.k 96 lp+GfrF+Pt+ee++ +yL+ k+ g + e++ v++evd yk++PwdL +k+k+++ w+fFs r+ k++++kr+nr+tk+g Wk tg+d++++++ + PON97166.1 12 LPVGFRFSPTEEEVIGHYLRLKILGMDSEVDPVMAEVDFYKWDPWDLTsqSKIKSNDPVWWFFSLRSYKNSKSKRSNRKTKTGSWKITGQDHKIKCReT 110 79**************************999**********84348888888**********************************734 PP NAM 97 gelvglkktLvfykg.rapkgektdWvmheyr 127 + +g k++Lvf g +ap +Wvmhey PON97166.1 111 KCFIGGKRVLVFQPGpSAPGKGTYHWVMHEYY 142 445******994555555669****6 PP

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence
MGSNAVVLPS NLPVGFRFSP TEEEVIGHYL RLKILGMDSE VDPVMAEVDF YKWDPWDLTS 60 QSKIKSNDPV WWFFSLRSYK NSKSKRSNRK TKTGSWKITG QDHKIKCRET KCFIGGKRVL 120 VFQPGPSAPG KGTYHWVMHE YYHEPDNTFP NQRAYVVCRL ERKPDEKSQK ADTDCDNGES 180 SGNIIALEAA VPEAASEDDV TNFVNSIIVD PEENDYFYNS HIVDPEENNC AVTMENLFNN 240 SRLRASSKRS YSRDGPVSSD TDNKGGNQRY FQTLQDSGSS DSPGGSKKVR HLKMLKTPIE 300 TLHTSTVDNA IQETIVNQLF EEDASSDNST AYVGDINCIN LVSEEDIWEI NRLDLVTEEC 360 YDVPVRGRVG QKRIQPQKKV SSAAISGKKV REAAKHTSAS VDRPREEKTT AESQDVRNKA 420 QSSNSEKHLK SARRESTLGN WKSFFIFEET SPVLSCSSTP PSVYVSNAIV GTVLFVVFVR 480 ELVLFGSWC

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence

MGSNAVVLPS NLPVGFRFSP TEEEVIGHYL RLKILGMDSE VDPVMAEVDF YKWDPWDLTS  60
QSKIKSNDPV WWFFSLRSYK NSKSKRSNRK TKTGSWKITG QDHKIKCRET KCFIGGKRVL  120
VFQPGPSAPG KGTYHWVMHE YYHEPDNTFP NQRAYVVCRL ERKPDEKSQK ADTDCDNGES  180
SGNIIALEAA VPEAASEDDV TNFVNSIIVD PEENDYFYNS HIVDPEENNC AVTMENLFNN  240
SRLRASSKRS YSRDGPVSSD TDNKGGNQRY FQTLQDSGSS DSPGGSKKVR HLKMLKTPIE  300
TLHTSTVDNA IQETIVNQLF EEDASSDNST AYVGDINCIN LVSEEDIWEI NRLDLVTEEC  360
YDVPVRGRVG QKRIQPQKKV SSAAISGKKV REAAKHTSAS VDRPREEKTT AESQDVRNKA  420
QSSNSEKHLK SARRESTLGN WKSFFIFEET SPVLSCSSTP PSVYVSNAIV GTVLFVVFVR  480
ELVLFGSWC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.2	5e-37	NAC family protein