PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON96963.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 423aa MW: 46120.8 Da PI: 5.9053

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON96963.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.7	1.5e-30	239	297	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers++dp+++++tY+geH+h+ PON96963.1 239 NDFWAWRKYGQKPIKGSPYPRNYYRCSSSkGCAARKQVERSNTDPDTFVVTYTGEHTHP 297 79***********************998**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MAEDWDLYAV VRSCKSVTTT SSSATTATTA AAAAAATTDS MKSGKTTSLS EDSLSCLASL 60 TFEEENDPFF SFPNLGEPRT NAFQELQEFY KPFFSINPNP TTTVMGTSTQ GIIPNSSISH 120 FGGSSGQQHH VLQYDVPQRQ QQQQHHLRPP PNDVAGSQFS PKPYVSGFGG LHKRHQLHEQ 180 DQDSQLLLPR ETSPLATPTS PLPPLPLPTM PISQSPRSRK RKNQQKKMVC HVSAENLSND 240 FWAWRKYGQK PIKGSPYPRN YYRCSSSKGC AARKQVERSN TDPDTFVVTY TGEHTHPRPT 300 HRNSLAGSTR NKLSPATASA AKRDSSDQSS PPPPQSATSL SPTTPLTVAQ TEEEAGAKKK 360 QPEEEGRGGE KGSEDILVED EMDLHENEGE DDDDDVLIPN MGLSDDFFLG LTELGCSPPG 420 AAC

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MAEDWDLYAV VRSCKSVTTT SSSATTATTA AAAAAATTDS MKSGKTTSLS EDSLSCLASL  60
TFEEENDPFF SFPNLGEPRT NAFQELQEFY KPFFSINPNP TTTVMGTSTQ GIIPNSSISH  120
FGGSSGQQHH VLQYDVPQRQ QQQQHHLRPP PNDVAGSQFS PKPYVSGFGG LHKRHQLHEQ  180
DQDSQLLLPR ETSPLATPTS PLPPLPLPTM PISQSPRSRK RKNQQKKMVC HVSAENLSND  240
FWAWRKYGQK PIKGSPYPRN YYRCSSSKGC AARKQVERSN TDPDTFVVTY TGEHTHPRPT  300
HRNSLAGSTR NKLSPATASA AKRDSSDQSS PPPPQSATSL SPTTPLTVAQ TEEEAGAKKK  360
QPEEEGRGGE KGSEDILVED EMDLHENEGE DDDDDVLIPN MGLSDDFFLG LTELGCSPPG  420
AAC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52830.1	1e-58	WRKY family protein