PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON96888.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 390aa    MW: 42994.6 Da    PI: 4.499
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON96888.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-19134184155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ kl+g
  PON96888.1 134 KKFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDNAAIKLRG 184
                 59********.**********82....35*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MMEQSILCPI KCTEHRTVTK KLTRPPSKKS SSSSSQQQQH ESSSAAPRVV RISVTDPDAT  60
DSSSDEEGEF LSRQRVKRYV HQVNIETSSC KPSLLAANVR KRPAVEGPTY RRSVKTNPHG  120
TTTSTTASPT NTNKKFRGVR QRPWGKWAAE IRDPARRVRL WLGTYDTAEE AAMVYDNAAI  180
KLRGPDALTN FVTPVPEPEQ EEMTGPASIS GYDSSEESRN LSSPTSVLHF RTHSNDELEG  240
EAQKPLQEPE ALSRPLKQEA EEVVVVVGVP QECQDETTTT NLPDDLGDHL SLDFPPFQDD  300
FFFSFQSPES TTLFDPSFFL DDDGGCAALA EAVAAFPPLP DYIVKEDFSD MFLEPPPSSY  360
DMSSGGGEST CQGDDLFRDI LLGSDPLVVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.16e-61ERF family protein