PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON96874.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 385aa    MW: 41857.8 Da    PI: 4.7763
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON96874.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH391.5e-12132182255
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++h  +Er+RR+++N+ ++ Lr+l+P     + k+ + a+i   +v+YI +Lq
  PON96874.1 132 KMSHITVERNRRKQMNEHLSVLRSLMPCF---YVKRGDQASIIGGVVDYITELQ 182
                 789*************************9...9*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MDDATLSAAD FFDDHDQFGS DDHVNKLASG DDLFSILESL EADVVDFPAL DETTGFVAGS  60
KFESDQETTS STRLVSQKST SSSTFQELSE TELDQTLLKP KSKRAKLSAA ANHSSTTSEE  120
EAALNPSDGQ GKMSHITVER NRRKQMNEHL SVLRSLMPCF YVKRGDQASI IGGVVDYITE  180
LQQVLQSLEA KKQRKIYSEV LSPRVVSSPR ASPVLLSPRK PPLSPRLISS LPISPRTPQP  240
GSPYKPPRLQ QSYLINSPTM PTSTTTTTTN STSNTSLEPS PTSSSTSSNI NNDNVNELFA  300
NSKSAVADVE VKFSGSNVLL KTVSPRIPGQ AVKIIAALED LSLEILDVSI NTIDETMLNS  360
FTIKIGIECQ LSAEELAHQI QQTFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.12e-47bHLH family protein