PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON96363.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 357aa MW: 40530.4 Da PI: 7.3254

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON96363.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.2	2.5e-56	16	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+++yL +kv ++ +++ ++i evd++k+ePwdLp ++k +ekewyfF++rd+ky+tg r+nrat++gyWkatgkdke+++ +++l PON96363.1 16 LPPGFRFHPTDEELITHYLSPKVLNNGFSA-RAIGEVDLNKCEPWDLPWRAKMGEKEWYFFCQRDRKYPTGLRTNRATDAGYWKATGKDKEIFK-GKTL 112 79*************************9.89***********888999*************************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kktLvfykgrapkgek++Wvmheyr PON96363.1 113 VGMKKTLVFYKGRAPKGEKSNWVMHEYRS 141 ***************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MENSSGLCKE DEHMDLPPGF RFHPTDEELI THYLSPKVLN NGFSARAIGE VDLNKCEPWD 60 LPWRAKMGEK EWYFFCQRDR KYPTGLRTNR ATDAGYWKAT GKDKEIFKGK TLVGMKKTLV 120 FYKGRAPKGE KSNWVMHEYR SDGKYCVYNL SRATKNEWVI CRVFQKSCGG KKTHISGLVR 180 LSSSYGPSLL PPLMESSPPP PHNIGPRTSV GKATAPTHVT CFSDPMEEDQ KAQQQDAMIQ 240 SFNQHDHFLL ASSNPSSHNS NNIFLRPNPL HHQNAFFSNN NQLPQSFGNL QYPDSVLMQE 300 QSVLSMLIEN QAPKMEGTRS KTEYSQSTDD MAQRSFDDQD DPSSSAGPVD LDCLWNY

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MENSSGLCKE DEHMDLPPGF RFHPTDEELI THYLSPKVLN NGFSARAIGE VDLNKCEPWD  60
LPWRAKMGEK EWYFFCQRDR KYPTGLRTNR ATDAGYWKAT GKDKEIFKGK TLVGMKKTLV  120
FYKGRAPKGE KSNWVMHEYR SDGKYCVYNL SRATKNEWVI CRVFQKSCGG KKTHISGLVR  180
LSSSYGPSLL PPLMESSPPP PHNIGPRTSV GKATAPTHVT CFSDPMEEDQ KAQQQDAMIQ  240
SFNQHDHFLL ASSNPSSHNS NNIFLRPNPL HHQNAFFSNN NQLPQSFGNL QYPDSVLMQE  300
QSVLSMLIEN QAPKMEGTRS KTEYSQSTDD MAQRSFDDQD DPSSSAGPVD LDCLWNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-123	NAC family protein