PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON95870.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

C2H2

Protein Properties

Length: 262aa MW: 28778.5 Da PI: 7.4966

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON95870.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.1	0.00029	89	111	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k F ++ L H++ H PON95870.1 89 FECQYCFKEFANSQALGGHQNAH 111 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MAKGASNHFS SACDGENDHG YSAGSSIEKK LKLFGFELNP CKNDGDITSL KGSAEGDESV 60 NSSNSVSYGK DKLSKEKSSS STEPDEKKFE CQYCFKEFAN SQALGGHQNA HKKERMKKKR 120 LQLQARKASI NYYLQPFQNN PAFSYHNSST TPLFYDANSY ASEFTIYDES HQISFNPFDS 180 DSSHFQQSSQ VSKLYSLSSC NSVPFQQDTS CKFTLTHAAE RSGSGNGSVI FKPSPLSGPK 240 QSCKSLDLQL GLGFESNIQS ST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10480.1	2e-16	C2H2 family protein