PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON95702.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 502aa MW: 56821.4 Da PI: 7.4963

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON95702.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	151.2	4.8e-47	17	145	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.k 96 lppGfrF+Ptdeelv +yL++kv + + +++i+e+++++++PwdLp+ e++ yfF +++ ky++g+r+nr t+sgyWkatg+dk+++s+ PON95702.1 17 LPPGFRFQPTDEELVFQYLRRKVFSCQlpPYSSDIIPEINVCNYDPWDLPA--GDIEQDRYFFNNKEAKYKNGNRTNRRTSSGYWKATGSDKKIVSStM 113 79******************9998855334578***********3..3446789*******************************9866 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++ vg++ktLvfy+g+ p+g +tdW+mhey+l PON95702.1 114 KHIVGTRKTLVFYRGKPPHGARTDWFMHEYSL 145 778*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MINKFNFVRN NNGVIKLPPG FRFQPTDEEL VFQYLRRKVF SCQLPPYSSD IIPEINVCNY 60 DPWDLPAGDI EQDRYFFNNK EAKYKNGNRT NRRTSSGYWK ATGSDKKIVS STMKHIVGTR 120 KTLVFYRGKP PHGARTDWFM HEYSLAIINP QTNISAQQIS ENQTDQNWVL CRIFYKERST 180 KKKDDNEGII QNWKDNDKVE RTGIYEPKLF DLVMGCNINM GPVSSSSSSS SSSSSSSVTE 240 VSSSNTYACH EGSNILAIPP KLRPILWRKV EEMRRRRSGG GGLGGTLSKK ELLTDGEVFL 300 HHSTDENGSS KPSTPEDSVS SSGSQPKPEK VTKEEEKEPE SEERKETKED ENEERSRKDD 360 GKDEERDVEA VKAVAVEKVV VVEELEEEEG NLCPGSPSFR VYYIESLVEK NEGKNDSADE 420 NDTRKKWRRA HSVDSIELVD SNEDQEGTKI IKKRGKNRMR LTRAICRGPI AVKHLLNVSS 480 CYHPSNEGAS LLTRKSAAPS TV

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MINKFNFVRN NNGVIKLPPG FRFQPTDEEL VFQYLRRKVF SCQLPPYSSD IIPEINVCNY  60
DPWDLPAGDI EQDRYFFNNK EAKYKNGNRT NRRTSSGYWK ATGSDKKIVS STMKHIVGTR  120
KTLVFYRGKP PHGARTDWFM HEYSLAIINP QTNISAQQIS ENQTDQNWVL CRIFYKERST  180
KKKDDNEGII QNWKDNDKVE RTGIYEPKLF DLVMGCNINM GPVSSSSSSS SSSSSSSVTE  240
VSSSNTYACH EGSNILAIPP KLRPILWRKV EEMRRRRSGG GGLGGTLSKK ELLTDGEVFL  300
HHSTDENGSS KPSTPEDSVS SSGSQPKPEK VTKEEEKEPE SEERKETKED ENEERSRKDD  360
GKDEERDVEA VKAVAVEKVV VVEELEEEEG NLCPGSPSFR VYYIESLVEK NEGKNDSADE  420
NDTRKKWRRA HSVDSIELVD SNEDQEGTKI IKKRGKNRMR LTRAICRGPI AVKHLLNVSS  480
CYHPSNEGAS LLTRKSAAPS TV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	6e-67	NAC family protein