PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON95434.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | NAC | ||||||||
Protein Properties | Length: 238aa MW: 27245.9 Da PI: 9.5697 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 106.2 | 4.1e-33 | 14 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkdkevlsk..k 96 lp G+rF Ptdee++ +yLkkkv++ +l + vi+e+d+++++Pw Lp v +++ yfF++r++ + +k ++r+ sg+Wk kdk ++++ + PON95434.1 14 LPIGYRFCPTDEEVLLHYLKKKVHALPLAA--VIPEFDVFQTDPWGLPGDV---KEKRYFFCNRKRDIVNnNKMHKRVSGSGFWKPISKDKLIVASelN 107 699**********************99777..9***************554...4578******9998862556677999**************99888 PP NAM 97 gelvglkktLvfykgra..pkgektdWvmheyrl 128 +++vg++ktLvf +g + + ++t+W+mhey++ PON95434.1 108 NHAVGVRKTLVFRSGGKglLQDSNTRWFMHEYHF 141 999**********76441245689********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MEKLEFLTNG GLKLPIGYRF CPTDEEVLLH YLKKKVHALP LAAVIPEFDV FQTDPWGLPG 60 DVKEKRYFFC NRKRDIVNNN KMHKRVSGSG FWKPISKDKL IVASELNNHA VGVRKTLVFR 120 SGGKGLLQDS NTRWFMHEYH FVRSGTIPIN SVHLMNEYYW VVCKVFQKKR RPKREDSSNR 180 KRMRTEGPST PSFSGSSGIT EVSSQSNGGL ELEDHDQEEE SSANNISHCS NSCIREPN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 167 | 174 | QKKRRPKR |
2 | 168 | 173 | KKRRPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 3e-42 | NAC family protein |