PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON95407.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TCP

Protein Properties

Length: 305aa MW: 32654.4 Da PI: 9.5482

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON95407.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	126.7	2.4e-39	59	143	2	86
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnss 86 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as+ a+ s+s+++ s PON95407.1 59 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALaAAGGSVSQQG-TS 143 789******************************************************************99854444444433.22 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MDPKGSKQPQ EVPNFLSLPQ PQQQQQPQPN TNMGENKAAE IKDFQIVIAD KDETKKQLAP 60 KRSSNKDRHT KVEGRGRRIR MPALCAARIF QLTRELGHKS DGETIQWLLQ QAEPSIIAAT 120 GTGTIPASAL AAAGGSVSQQ GTSLSAGLHQ KIDELGGSGI GSGSRTSWAM VGGNLGRPHV 180 ATGIWPPVSG FGFQSSSGPS TTNLGTESSN YLQKIGFSGF DLPVTNMGPM SFTSILGGNN 240 QQLPGLELGL SQDGHIGVLN PQALTQMYHQ QMGQARVHHQ QQQQQQHQHQ HQQPPAKDDS 300 QGSGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	3e-77	TCP family protein