PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON95389.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family C2H2
Protein Properties Length: 253aa    MW: 28646.3 Da    PI: 8.7276
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON95389.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88.2e-0595117223
                 EETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                 +C+ C+++++++ +L  Hi+  H
  PON95389.1  95 SCSVCSRVYPTSRLLSIHISEaH 117
                 6******************9888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MAMDVEEGQL GFPYWQPVCR RFDPDSPFFA SGNIERELLA KQVAIDLTED EKNYLRSWVA  60
EDSTRGVFCP IAGCGAHLTS LEDFEDHYNK RHTASCSVCS RVYPTSRLLS IHISEAHDSF  120
FQAKVARGYA MYECLVEGCT LKFKSYKSRH QHLVDKHKFP TSFEFFKKAC PSKKLRQKQQ  180
RKQANHKKAE ASSMEVEIET IDGLVSAVSK LSTSDSSPSS ISFGRRNARG LTFVPRAIQR  240
DKRPDSSSAE TKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14140.11e-111C2H2 family protein