PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON95073.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family C2H2
Protein Properties Length: 216aa    MW: 24140.4 Da    PI: 4.4274
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON95073.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.000244365123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C  C++ F++   L  H++ H
  PON95073.1 43 YECVFCKRGFTTAQALGGHMNIH 65
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MAESSGHHIY ELLDSKSSSD ETITDRSDQN DETGPVVVAG RSYECVFCKR GFTTAQALGG  60
HMNIHRKNRG PKATKLHRNN IDPTLAASSK LGEENYATTF RSFLAIQSYP PLQYLANKAP  120
EGIHVNYQTY NFPAATATWS SDNMGRVPPP DQVGHDDDPR EYLSLGIGVT SREEEEEESI  180
DDEEILEKNN NKEKISGLDY NEDVELDLEL RLGYDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.11e-13C2H2 family protein