PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON94229.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WOX

Protein Properties

Length: 244aa MW: 27525.9 Da PI: 9.4314

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON94229.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.7	1.5e-21	96	155	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +Le+l++ r+p+a+++e+++++l +++ ++V++WFqN++a+e++ PON94229.1 96 TRWNPTQEQIGILETLYRGgMRTPNAQQIEQITAQLgkfgKIEGKNVFYWFQNHKARERQ 155 7***************99************************************97 PP
2	Wus_type_Homeobox	117	8.9e-38	96	157	4	65
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+Pt+eQi iLe+ly+ G+rtPn+++i++ita+L ++Gkie+kNVfyWFQN+kaRerqkq PON94229.1 96 TRWNPTQEQIGILETLYRGGMRTPNAQQIEQITAQLGKFGKIEGKNVFYWFQNHKARERQKQ 157 8***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MGGSMKVHQF ARGLWEAHEP SLTLGACKRL RPLAPKLQPT NPDSPISSTT TTTSPNSIAP 60 FDLKSFIRPE SGPRKLGSSL DHKKDSSQVE THPGGTRWNP TQEQIGILET LYRGGMRTPN 120 AQQIEQITAQ LGKFGKIEGK NVFYWFQNHK ARERQKQKRN SLGLSHSPRT PTTIPPVTIN 180 LDTRLGGDVE GDREDSTSPY KRKCRSWGFE CLVEDYNNRL CYDNNKEEEG DRTLELFPLH 240 PEGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46480.1	9e-75	WOX family protein