PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON94216.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 272aa MW: 29726.1 Da PI: 7.1273

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON94216.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	88.7	1e-27	11	147	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkya....tgkrknratksgyWkatgkd 89 lp+G rF P++eel+ +yL+ k ++ + + + ike+d+y ++P +Lp+ +++++w+ ++ ++ ++ +++r++r +++gyW+++g++ PON94216.1 11 LPAGTRFYPSEEELLGHYLRGKNANPS-GV-SLIKELDLYGHDPFELPEgvgypyGRGGKKRHWFCYTAAAAAAGrdvnRKSREKRRARNGYWRKKGRT 107 799*****************98877.33.57***********65676542223556888887777665555545678888899****** PP NAM 90 kevlsk.kgelvglkktLvfykgra.pkgektdWvmheyr 127 + v+ ++ + g+k+++v+y gr+ +++++tdWv+ ey+ PON94216.1 108 TGVMGPgGNDVLGTKTSFVYYLGRStKTAVRTDWVLYEYA 147 *9566679*****996515678*******7 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MENPNAASFS LPAGTRFYPS EEELLGHYLR GKNANPSGVS LIKELDLYGH DPFELPEGVG 60 YPYGRGGKKR HWFCYTAAAA AAGRDVNRKS REKRRARNGY WRKKGRTTGV MGPGGNDVLG 120 TKTSFVYYLG RSTKTAVRTD WVLYEYAAVD DHQASFVLCR VFFKPRTRNS ISGSGFFFSA 180 EGSISAVRHI GIQHDGSVIQ DKEVEGQILT GQAPVTLIGC SIGGSISIFI EINAKEASSV 240 TNNSEMNTSA STDEDVLSTV NNDYLEVDDL AD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	91	104	REKRRARNGYWRKK
2	93	106	REKRRARNGYWRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	2e-23	NAC family protein