PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON94010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | NF-YB | ||||||||
Protein Properties | Length: 231aa MW: 25268.1 Da PI: 4.9037 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 169.4 | 4.2e-53 | 62 | 158 | 1 | 97 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 vreqd+++Pianv+rim+++lP++akis+daket+qecvse+isf+t+ea+d+cqre+rkt++++d+lwa+a+lGf+dyvepl+++l++yre e+++ PON94010.1 62 VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANDRCQREQRKTVTAEDVLWAMAKLGFDDYVEPLTLFLTRYRESETDR 158 69********************************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MLNLIIVNAS ILQFVTHVYI YYISAALGTV VANNNNSNDN NAGGDGENAG GTGERVRGAC 60 VVREQDQYMP IANVIRIMRR ILPSHAKISD DAKETIQECV SEYISFITGE ANDRCQREQR 120 KTVTAEDVLW AMAKLGFDDY VEPLTLFLTR YRESETDRTS LRSEPFVKRS SAIDQFGHPG 180 PYGPAFQLGP YPPGMFDPAG GYFRDGSGPT GGGSSSQNGG LGSYDPFGQY K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21970.1 | 3e-66 | NF-YB family protein |