PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON93585.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family Nin-like
Protein Properties Length: 314aa    MW: 36284 Da    PI: 5.7529
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON93585.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK82.73.5e-26157207252
      RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 +k++s ++ls+y+++pi++AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl
  PON93585.1 157 SKTLSRQVLSQYYYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSL 207
                 689*********************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MVAKDENPFD PFSTQFLSSP PNFSGDGYQF STNFEQNWQN ELPIQESILL DAVPLMEYYP  60
TDPLYSTVEL EPLPSIIQDD ILSNNGNGLE VWDDIGVLGF EANYNQKKPS LLLCNDPSNI  120
NGDDQKGKEK MKREKKIVKR RLSCRISSEE KSSTSASKTL SRQVLSQYYY MPITQAAKEL  180
NVGLTLLKKR CRELGIRRWP HRKLMSLQTL IKNVQDLGKE EGDHQENDSK LKNAIELLER  240
EKKLVEEVPD IQLDDTTKRL RQACFKANYK KRKLRIMDSD HYHHSGLNTK YLEEEDEEIK  300
SLLSDSFSST NHLF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135142KKIVKRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.12e-44Nin-like family protein