PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON93564.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | NAC | ||||||||
Protein Properties | Length: 356aa MW: 40184.5 Da PI: 9.0759 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 180 | 6.1e-56 | 16 | 142 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+++yL kkv ++++ + ++i evd++k+ePwdLp k+k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ +++l PON93564.1 16 LPPGFRFHPTDEELISHYLYKKVVNTNFCC-RAIGEVDLNKSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYR-GKSL 112 79*************************999.89***************888999****************************************.999* PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg+kktLvfykgrapkgek++Wvmheyrle PON93564.1 113 VGMKKTLVFYKGRAPKGEKSNWVMHEYRLE 142 ****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 356 aa Download sequence |
MENVLGQVKE DEQLDLPPGF RFHPTDEELI SHYLYKKVVN TNFCCRAIGE VDLNKSEPWD 60 LPWKAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT GKDKEIYRGK SLVGMKKTLV 120 FYKGRAPKGE KSNWVMHEYR LEGKFSIHNL PKTAKNEWVI CRVFQKSSGG KKIPITGLNR 180 LTPFGNEMGS FGLPPLMDSS SPYSTKSKPV VPQSVNVPCF SNPMNVQRNQ DETMVDSITN 240 SLYGAVSNTN VIPTATTTIP LLNSLYSAQN CVVSSSSASA SMQFPSNSVM VHQNSSNDQS 300 ILRALLENNG SNLRQSFKTE RDNTEISSVM ANLEMGRRQF GDQALPHADI ESFWNY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 1e-136 | NAC family protein |