PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON93067.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

CAMTA

Protein Properties

Length: 1114aa MW: 124689 Da PI: 8.6062

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON93067.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	174.2	1.7e-54	20	136	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 +e ++rwl+++ei++iL n++k++lt +++ +p+ gsl+L++rk +ryfrkDG+ w+kkkdgktv+E+hekLK g+v+vl+cyYah+een +fqrr+yw PON93067.1 20 QEaQHRWLRPTEICEILRNHHKFQLTPDPPLTPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKTVKEAHEKLKAGSVDVLHCYYAHGEENDSFQRRSYW 118 5559********************************************************************************************* PP CG-1 101 lLeeelekivlvhylevk 118 +L+ +le+ivlvhy+evk PON93067.1 119 MLDGQLEHIVLVHYREVK 136 *************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1114 aa Download sequence
MAELKRFLPN QQLDLEQILQ EAQHRWLRPT EICEILRNHH KFQLTPDPPL TPPAGSLFLF 60 DRKALRYFRK DGHRWRKKKD GKTVKEAHEK LKAGSVDVLH CYYAHGEEND SFQRRSYWML 120 DGQLEHIVLV HYREVKEGYK SGVSRLLPTP RPLVESPQNS FAQANSPAPT VQTSFATNPN 180 RVEWNGQTLS SEFEDVDSGD NPGATLMQPA LGSISHNSSL LSHSDAGFTE LSRNPPGSWY 240 SGPKLYHAAG SSVWAPTHGS TRHEESMRGQ KCDVEEPGGA DFITHKLTGA RLDVDGKVSD 300 IFALSDRLIT DMGIQVAPLA SKRDIEVTQE RNLNSVDPPF HCYSDPQMVA TFASKVEKKS 360 EDKDVTLPNH ESGELKKLDS FGRWMDKEIG VDCDDSLMAS DSGNYWNAID AENDDKEVSS 420 LSHHMQLEID SLGPSLSQEQ LFSICDFSPD WTYSGVETKV LIAGRFLGSK KHSDETKWGC 480 MFGEIEVPAE VVIDNVIRCK TPLHASGHVP FYVTCSNRLA CSEVREFEYR VKPQGIAVNS 540 APEDELRLQI RLGKLLSLGS ERKSLNCSIL DCDKCKLKDS ICSRKFKIGH LRSSDILIQN 600 LLKDRLYQWL IFKIHEEGKG PHVLDDEGLG VIHLAAALGY QWAIGPIVAA GVSPNFRDAR 660 GRTGLHWASC FGREETVVAL VRLGTAPGAV DDPTPAFPGG QTAADLASSR RHKGIAGYLA 720 EADLTSHLSS LKINENVADI SGARIAAESA TEAEAKVVTS GLGVDNHSLK GSLAAVRKSA 780 HAAALIQASF RNRSFRHRQL TKIRDDVSND SVDLVALGSL NKVQQSSHFE DYLHSAAKKI 840 QKKYRGWKGR KEFLDIRSRI VKIQAYVRGH QVRKQYKKLV WSVSILEKVI LRWRRKGVGL 900 RGFRVEKATE DASRDIKRSD EYEFLRIGRR QKCAAVEKAL LRVKSMVRHP EAREQYMRLV 960 SKFEKFELRR QQPPPPSIPF ALFRPGSERI SHLQPDPTNL APTPLISHLS AEFFAGFLDP 1020 LSHSTIPSKT SEFFSHYFEF QHVLSTFQPL GLTIQATKLS NLAYKTGFPP PSHIHSASYS 1080 QIRRPTSLIA EILLFSPYLL NFAYQSLLCS SVAV

Sequence ? help Back to Top

Protein Sequence Length: 1114 aa Download sequence

MAELKRFLPN QQLDLEQILQ EAQHRWLRPT EICEILRNHH KFQLTPDPPL TPPAGSLFLF  60
DRKALRYFRK DGHRWRKKKD GKTVKEAHEK LKAGSVDVLH CYYAHGEEND SFQRRSYWML  120
DGQLEHIVLV HYREVKEGYK SGVSRLLPTP RPLVESPQNS FAQANSPAPT VQTSFATNPN  180
RVEWNGQTLS SEFEDVDSGD NPGATLMQPA LGSISHNSSL LSHSDAGFTE LSRNPPGSWY  240
SGPKLYHAAG SSVWAPTHGS TRHEESMRGQ KCDVEEPGGA DFITHKLTGA RLDVDGKVSD  300
IFALSDRLIT DMGIQVAPLA SKRDIEVTQE RNLNSVDPPF HCYSDPQMVA TFASKVEKKS  360
EDKDVTLPNH ESGELKKLDS FGRWMDKEIG VDCDDSLMAS DSGNYWNAID AENDDKEVSS  420
LSHHMQLEID SLGPSLSQEQ LFSICDFSPD WTYSGVETKV LIAGRFLGSK KHSDETKWGC  480
MFGEIEVPAE VVIDNVIRCK TPLHASGHVP FYVTCSNRLA CSEVREFEYR VKPQGIAVNS  540
APEDELRLQI RLGKLLSLGS ERKSLNCSIL DCDKCKLKDS ICSRKFKIGH LRSSDILIQN  600
LLKDRLYQWL IFKIHEEGKG PHVLDDEGLG VIHLAAALGY QWAIGPIVAA GVSPNFRDAR  660
GRTGLHWASC FGREETVVAL VRLGTAPGAV DDPTPAFPGG QTAADLASSR RHKGIAGYLA  720
EADLTSHLSS LKINENVADI SGARIAAESA TEAEAKVVTS GLGVDNHSLK GSLAAVRKSA  780
HAAALIQASF RNRSFRHRQL TKIRDDVSND SVDLVALGSL NKVQQSSHFE DYLHSAAKKI  840
QKKYRGWKGR KEFLDIRSRI VKIQAYVRGH QVRKQYKKLV WSVSILEKVI LRWRRKGVGL  900
RGFRVEKATE DASRDIKRSD EYEFLRIGRR QKCAAVEKAL LRVKSMVRHP EAREQYMRLV  960
SKFEKFELRR QQPPPPSIPF ALFRPGSERI SHLQPDPTNL APTPLISHLS AEFFAGFLDP  1020
LSHSTIPSKT SEFFSHYFEF QHVLSTFQPL GLTIQATKLS NLAYKTGFPP PSHIHSASYS  1080
QIRRPTSLIA EILLFSPYLL NFAYQSLLCS SVAV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.1	0.0	CAMTA family protein