PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON92954.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | YABBY | ||||||||
Protein Properties | Length: 96aa MW: 10956.4 Da PI: 10.2278 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 121.5 | 1.3e-37 | 8 | 60 | 118 | 170 |
YABBY 118 PPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 PekrqrvPsaynrfik+eiqrik+ nPdishreafsaaaknWahfP+ihfgl PON92954.1 8 APEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGL 60 5**************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 96 aa Download sequence |
MYVLSTPAPE KRQRVPSAYN RFIKDEIQRI KSVNPDISHR EAFSAAAKNW AHFPHIHFGL 60 MPDQSGKRTN VRQQEGEVMM KDGFFASANH VGVSPY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45190.1 | 3e-45 | YABBY family protein |