PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON92379.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 323aa MW: 37079.2 Da PI: 6.1526

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON92379.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	121.6	7.1e-38	58	185	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 lp+GfrF Ptd el+ +yL kkv++++l+ + i++vd+yk+ Pw+L++ +++ +++ y+F++r+++ ++g+r+nrat +gy ka+gkd +++ + PON92379.1 58 LPKGFRFVPTDAELI-FYLLKKVRNDTLPP-NRIRDVDLYKFSPWHLEEmhTLHVSDRgARYYFTPRHRRCKKGNRPNRATVDGYYKASGKDVAIFF-R 153 799**********.9******999.77**********84234445666456********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 g+ +g k++Lvf+kg+ pkg ktdW+m+e+ l PON92379.1 154 GRIIGSKRSLVFHKGKFPKGDKTDWLMQEFML 185 99**************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MEDQITSNLV VHRNMMYHAH HAHVLSPMAE NDSYLSSTSS SSSSNVKDDS NPSYVDKLPK 60 GFRFVPTDAE LIFYLLKKVR NDTLPPNRIR DVDLYKFSPW HLEEMHTLHV SDRGARYYFT 120 PRHRRCKKGN RPNRATVDGY YKASGKDVAI FFRGRIIGSK RSLVFHKGKF PKGDKTDWLM 180 QEFMLEDAEQ RRKEGKDDDM KLDDWVLCKL YKKGHPETTK GREMETEDED AQVVPPSEEQ 240 DTPSLHHEEA PQQINAYVSY STSQQPIQAS PTHSISLSTG GFDIYSSNND SYIDYISDIV 300 IDDDLDYIDS ILNSELAKKN GGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08790.1	1e-42	NAC family protein