PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON92042.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | MYB | ||||||||
Protein Properties | Length: 332aa MW: 37064.2 Da PI: 5.0465 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.7 | 3.6e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+lv+++k g+ +W++ ++ g+ R++k+c++rw +yl PON92042.1 14 KGPWTAEEDEILVNYIKNNNGHgSWRSLPKLAGLLRCGKSCRLRWTNYL 62 79***************998888**********99************97 PP | |||||||
2 | Myb_DNA-binding | 52 | 1.7e-16 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++l+++++ +lG++ W++Ia+ ++ gRt++++k+ w+++l PON92042.1 68 RGPFTQEEEKLIIQLHGMLGNR-WAAIASQLP-GRTDNEIKNLWNTHL 113 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence |
MGRTPCCDRK GLKKGPWTAE EDEILVNYIK NNNGHGSWRS LPKLAGLLRC GKSCRLRWTN 60 YLRPDIKRGP FTQEEEKLII QLHGMLGNRW AAIASQLPGR TDNEIKNLWN THLKKRLLCM 120 GLDPHTHEPF ASQPHYPSTN SSPASPATRH MAQWESARLE AEARLSRESS LFTSAQHCTK 180 SNDSSDYFLR LWNSEVGDSF RKLTTRDDKT ACCSPVSQAS ASALTTEAGL NRAAFDTMAG 240 DQAEDVDCKS FIKFSNTEEE GEEEEEEDHV LIGAGSDSSC SNDMEDSSDS SALQLLLDFP 300 INNDMSFLEE NCGGHYTTDP AMLSENSFIC RL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 1e-116 | MYB family protein |