PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON91855.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | TCP | ||||||||
Protein Properties | Length: 257aa MW: 27290.3 Da PI: 10.166 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 122.4 | 5.1e-38 | 37 | 123 | 2 | 88 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg 88 a+k+++++++h kv+gR+RR+R++a+caar+F+L++eLG+++d+ ti+WLlqqa+p+i+++tgt++++as+ +++s+s+++n s + PON91855.1 37 APKRSSSKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKSDGDTIQWLLQQAEPSIIAATGTGTIPASALaASGASVSEQGN-SVS 123 789******************************************************************888533344444332.222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MAENKPAEIK DFQIMIANKD DTNNNNNNNN NNKKQLAPKR SSSKDRHKKV DGRGRRIRMP 60 ALCAARVFQL TRELGHKSDG DTIQWLLQQA EPSIIAATGT GTIPASALAA SGASVSEQGN 120 SVSSGLHSKM DVGRSHGVWP AISGIGSGFV QNSGQSTPSF AAENLNYLPK FGIHGFEFPG 180 MNLGSMSFPA IMGGGGNQQV PGLELGLSQD GHIRVLNSQT LVQFQQQAGQ RSVGGGGGDS 240 LVPRQQQSPE KDDSQSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27010.1 | 7e-65 | TCP family protein |