PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON91724.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

C2H2

Protein Properties

Length: 293aa MW: 32426 Da PI: 8.4985

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON91724.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.7	0.00038	226	248	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg Fs+ +L+ H + H PON91724.1 226 VCPQCGAKFSSVTTLVDHVEKvH 248 6*****************99888 PP
2	zf-C2H2	17.7	1e-05	265	287	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp+C+k F+++ +L+ H + H PON91724.1 265 VCPKCSKGFRDPVSLVEHVEReH 287 7*****************99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MGTPEFPDLG KHCSVEDCKL IDFLPFTCDR CRLVFCLEHR SYIKHRCPNA DKKDVTVVIC 60 PLCAKGVRLN PDEDPNITWE THVNTDCDPS NYERVTKKKK CPVPGCKEIL TFSNTLKCRD 120 CLVDHCLKHR FGPDHRCPGP KKPEPSFPFM GLLNRSRKEE QKPNRAPATS SPKWATSFLN 180 AASSVRASAE ASMTKLSNEI SQKWQIAKDG VAQSSSSGSS NGQMEVCPQC GAKFSSVTTL 240 VDHVEKVHER GGGNRAGVKK VTIDVCPKCS KGFRDPVSLV EHVEREHGGT SRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41835.1	1e-130	C2H2 family protein