PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON91625.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 243aa MW: 27456.8 Da PI: 9.8587 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 85.1 | 4e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g+ KKA+ELS+LCdaeva+iifs tgkl+e+ss PON91625.1 9 KKIDNVTARQVTFSKRRRGLVKKAQELSILCDAEVALIIFSATGKLFEFSS 59 68***********************************************96 PP | |||||||
2 | K-box | 35.6 | 3.9e-13 | 91 | 173 | 17 | 99 |
K-box 17 lqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++++ +L ke+ n ++R+++G dL L+l eL +L ++Le +l+++ ++K++ ++ +i l +k e+ +en++L++kl+ PON91625.1 91 NNTNHMRLSKEVANKSLQLRQMMGVDLRGLKLDELLHLVKKLEAGLTRVLETKEKRFRIEIAALERKGAEMIKENQQLKQKLM 173 4556778999999888899**************************************************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MAREKIKIKK IDNVTARQVT FSKRRRGLVK KAQELSILCD AEVALIIFSA TGKLFEFSSS 60 SMKDLLARCE AQHNNHEKSD QLPSLELQLE NNTNHMRLSK EVANKSLQLR QMMGVDLRGL 120 KLDELLHLVK KLEAGLTRVL ETKEKRFRIE IAALERKGAE MIKENQQLKQ KLMMKLYSKG 180 KKPVVMGYSD KYVIDINNTV MEERMSSNDQ SAATNVCSCN SSNASLADDY SDTSLKLGLP 240 CSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 7e-75 | MIKC_MADS family protein |