PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON91604.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB_related

Protein Properties

Length: 654aa MW: 68845.1 Da PI: 4.9575

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON91604.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.1	3.5e-07	199	243	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrw 44 r++W++ Ed l+ avk+ G g+W+ r g Rt+ q+ rw PON91604.1 199 RKPWSEAEDMELIAAVKKCGEGNWANMLR--GdfkGDRTASQLSQRW 243 789**********************9665..2334688888888887 PP

Sequence ? help Back to Top
Protein Sequence Length: 654 aa Download sequence
MIEKAKKQRK GSVSEEDIAT LLQRYTATTV LALLHEVANC TEVKIDWNAL VEKTSTGISN 60 AKEYQMLWRH LAYRHTLLED FEDGAQPLDD DSDLEYELEA VPAVSTEAST EAAACVKVLI 120 ASGLPSDSIP SGSTVEAPLT INIPNGLSSR ALDQQSCSMQ GTNITVPVSV QKQPVPSAPF 180 ADLDTNGSVG GNLQNRRKRK PWSEAEDMEL IAAVKKCGEG NWANMLRGDF KGDRTASQLS 240 QRWSIIRKRN GNLNLGCQSN GTQLSEAQLA ARHAMSVALK MPVKSITAGT ATTNSLARTN 300 SAGNSAVTNA TKHSMLITGE TSMGGSSFLQ SLKQSQENLT SKPSPVGSLG PTAKSRVPLK 360 KPVLKSAPTS DAMVRATAVA AGARIASPSD AASLLKAAQA KNAVHIMPTG GGPVKSSMAT 420 SGMPTHSEGH PNVHYIRTGL ASTPISTYPA ATPSASTPSS VKAIPPAVQH TPTVNGASLD 480 VCSKQNNDVS CTQACELPSK QAVKTEEISI SELGPPTKEQ IQGDQACISA NSEGELVKEN 540 KLASNAEDES VKENKVASPD INVELKGTSD IGNLASSMNV MTAENGNQVI IDVQPKGTEI 600 ENDTEMIDSI AGAGDNHGAV EEDGENQNID EMQEDLPAAE ACSEKLEIVC KEAV

Sequence ? help Back to Top

Protein Sequence Length: 654 aa Download sequence

MIEKAKKQRK GSVSEEDIAT LLQRYTATTV LALLHEVANC TEVKIDWNAL VEKTSTGISN  60
AKEYQMLWRH LAYRHTLLED FEDGAQPLDD DSDLEYELEA VPAVSTEAST EAAACVKVLI  120
ASGLPSDSIP SGSTVEAPLT INIPNGLSSR ALDQQSCSMQ GTNITVPVSV QKQPVPSAPF  180
ADLDTNGSVG GNLQNRRKRK PWSEAEDMEL IAAVKKCGEG NWANMLRGDF KGDRTASQLS  240
QRWSIIRKRN GNLNLGCQSN GTQLSEAQLA ARHAMSVALK MPVKSITAGT ATTNSLARTN  300
SAGNSAVTNA TKHSMLITGE TSMGGSSFLQ SLKQSQENLT SKPSPVGSLG PTAKSRVPLK  360
KPVLKSAPTS DAMVRATAVA AGARIASPSD AASLLKAAQA KNAVHIMPTG GGPVKSSMAT  420
SGMPTHSEGH PNVHYIRTGL ASTPISTYPA ATPSASTPSS VKAIPPAVQH TPTVNGASLD  480
VCSKQNNDVS CTQACELPSK QAVKTEEISI SELGPPTKEQ IQGDQACISA NSEGELVKEN  540
KLASNAEDES VKENKVASPD INVELKGTSD IGNLASSMNV MTAENGNQVI IDVQPKGTEI  600
ENDTEMIDSI AGAGDNHGAV EEDGENQNID EMQEDLPAAE ACSEKLEIVC KEAV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.2	2e-70	MYB_related family protein