PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON91002.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

DBB

Protein Properties

Length: 291aa MW: 31865.5 Da PI: 6.5687

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON91002.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.6	1.1e-07	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ ++++e++ fC+ ++ lC++C H+ H+ PON91002.1 4 QCDVCNKNEASVFCTADEAALCDTCDHRVHHAnklaskHQ 43 7***************************964446666676 PP
2	zf-B_box	25.5	2.8e-08	56	92	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg...Ht 38 + C+ ++ek++ lfC++++ lC++C +H g Ht PON91002.1 56 PLCDICQEKRAFLFCQQDRAILCRECDYPIH-GaneHT 92 78****************************9.547754 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MKIQCDVCNK NEASVFCTAD EAALCDTCDH RVHHANKLAS KHQRFSLLHP SSKQFPLCDI 60 CQEKRAFLFC QQDRAILCRE CDYPIHGANE HTQKHHRYLL TGVKLSPTSA IYESSSNAVS 120 DPKTTTTTTT TTTTTTTQSS SVKKSVTSVS PPVPNPAKNS TANGDDSTAL TSSISEYLIE 180 TLPGWHVEDF LDSSSAAAFG FSKSDGGILS PFWDCDLENN QVGLFPSENV GIWVPQAPAP 240 LSQHYPSEMG KLVGLKETKE ATTRSSWSDD GFTVPQINLP STGSKRCRPF W

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	2e-75	DBB family protein