PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON90822.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family C2H2
Protein Properties Length: 346aa    MW: 38314.7 Da    PI: 7.9388
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON90822.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.000266183123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C + F++   L  H+++H
  PON90822.1 61 YSCSFCRREFRSAQALGGHMNVH 83
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MEEARHWVWA KRKHGLISPH HDLQVPKIPS SSSYDDSWEE QAFAEDAAGP LGGCIWPPRS  60
YSCSFCRREF RSAQALGGHM NVHRRDRARL KQSPDLHHRE IVHQNHHQPH NNSSIPLHHQ  120
NPLITTTTTT STTTSLGPGH YGPSQVCALV YNPNPNSDPA GLFPPPSSSP SCNKLQNCEK  180
QAALLFPPYF SSSLVLENNK RSNNSTSTTC PMNPFPQSWS NLATDKYYRD SIHKDHIGDQ  240
KKISSITLEP GSCRSTTKVD YVKSTTDLSV SLNLVVCHAF PTSESGTGGK DQEAVLSCKR  300
RKIEPYSSVP SPLKPSSAES EAFQLGPCSI DDLDLELRLG DRPKVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.12e-28C2H2 family protein