PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON90559.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family C2H2
Protein Properties Length: 269aa    MW: 28523.3 Da    PI: 7.6826
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON90559.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2130.00031107129123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ykC+ C+k F++   L  H  +H
  PON90559.1 107 YKCSVCNKAFPSYQALGGHKASH 129
                 9***********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MALEALNSPT TTSPFSYGQD AEALHFHEPW IKRKRSKRPR LDHDRDHDHD HDHSHSPPQP  60
SEEEYLALCL IMLARGRGAS TSSAAAANDG GVASQLPPPP PALKLSYKCS VCNKAFPSYQ  120
ALGGHKASHR KSTTSSSSDA AVATAGGDNV STSTVSTSGG RTHECSICHK TFPTGQALGG  180
HKRCHYDGGS GNSTGGVTSS EGGAASSQSQ SQSQRGFDLN VPALPEFWPG FAIEVNRKSQ  240
LSGDQEVESP LPMKKPRLSN HEDLAASRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.12e-44C2H2 family protein