PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON90509.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 436aa MW: 49330.1 Da PI: 6.3209

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON90509.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.3	1.5e-53	21	148	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeel+++yL+ kv + ++ i+evd++++ePw+Lp +k +ekewyfFs rd+ky+tg r+nrat +gyWkatgkd+ev+s+ +g+ PON90509.1 21 LPPGFRFHPTDEELITFYLASKVYNGSFCG-VDIAEVDLNRCEPWELPDVAKMGEKEWYFFSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSAsNGA 118 79***********************877.34***********8888899**********************************997889 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 l g+kktLvfykgrap+gekt+Wvmheyrl PON90509.1 119 LLGMKKTLVFYKGRAPRGEKTKWVMHEYRL 148 9*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MLAMEEVLRE LSGEDINEQG LPPGFRFHPT DEELITFYLA SKVYNGSFCG VDIAEVDLNR 60 CEPWELPDVA KMGEKEWYFF SLRDRKYPTG LRTNRATGAG YWKATGKDRE VYSASNGALL 120 GMKKTLVFYK GRAPRGEKTK WVMHEYRLDG DFSSRHTCKE EWVICRIYHK TGDKKNALFQ 180 GRQSCLPALL ETQSPTPRNG LMLQENEYRT QNPMQTLQNQ SPFLNNCNNN IQKQNQNQNQ 240 NHHQENDLKS LINPVVSQSH LFPINGLIQP SSCFSVSPTT TSVTTTTTTT TTNKNPSTSS 300 SLLPSMLFKS LLSHQDCTWK EQEQPFTVPK QCKTEGNFSH FQAPPSSSDL DNDNHNNYLS 360 TFLPKTHPNP YHYQNPLLFE TDDYGVLAFS DAAADTDAAT LHEMSTSVAN FNRAGFQTLL 420 DPLTKLPGES WAPLDV

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MLAMEEVLRE LSGEDINEQG LPPGFRFHPT DEELITFYLA SKVYNGSFCG VDIAEVDLNR  60
CEPWELPDVA KMGEKEWYFF SLRDRKYPTG LRTNRATGAG YWKATGKDRE VYSASNGALL  120
GMKKTLVFYK GRAPRGEKTK WVMHEYRLDG DFSSRHTCKE EWVICRIYHK TGDKKNALFQ  180
GRQSCLPALL ETQSPTPRNG LMLQENEYRT QNPMQTLQNQ SPFLNNCNNN IQKQNQNQNQ  240
NHHQENDLKS LINPVVSQSH LFPINGLIQP SSCFSVSPTT TSVTTTTTTT TTNKNPSTSS  300
SLLPSMLFKS LLSHQDCTWK EQEQPFTVPK QCKTEGNFSH FQAPPSSSDL DNDNHNNYLS  360
TFLPKTHPNP YHYQNPLLFE TDDYGVLAFS DAAADTDAAT LHEMSTSVAN FNRAGFQTLL  420
DPLTKLPGES WAPLDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76420.1	1e-108	NAC family protein