PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON89824.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GATA
Protein Properties Length: 359aa    MW: 39028.8 Da    PI: 4.3834
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON89824.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.23.4e-16211247135
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg+++  Tp +Rrgp g++tLCnaCGl+++ kg+
  PON89824.1 211 CQHCGVSEqnTPAMRRGPAGPRTLCNACGLMWANKGT 247
                 **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MAAANPQPLQ ARPYEDHMRG PIPVDDDDDD EYEDGDGGGG GNDGDDAMDD LEETHMNSVS  60
VAEHGGLVMA SRTSELTLSF EGEVYVFPAV TPEKVQAVLL LLGGRDVPTG VPTVEVPYNQ  120
NNRDVAVGDA SKRSNLSRRI ASLVRFREKR KERCFDKKIR YTVRKEVAQR MHRKNGQFAS  180
LKESSGTSGW DSSQSGLQDG INRPETVLRR CQHCGVSEQN TPAMRRGPAG PRTLCNACGL  240
MWANKGTLRD LSKGGRNLSA DHIEPETPVD VKPLVAEAEL YGNQDEHGTS EDPSKTVTEG  300
SNDPSVNPDE EDLHAASEDL ANTLPIGIVH SPANDDEQEP LVELANPSDT DIDIATNFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.11e-66GATA family protein